Epitope mapping (HDX)
interaction or antibody-protein interaction site.
Place the sample into a deuterium solution to perform hydrogen-deuterium exchange, digest them with protease at seven different time points (10s,30s,60s,300s,600s,1200s,4800s) and use mass spectrometry to analyze and compare with the database to identify the lowest hydrogen-deuterium exchange rate site, that site might be the protein (or drug, antibody)-protein interaction site.
Working day not including delivery time: 5 weeks
(a) Sample type: Purified protein with amino acid sequence and condition of molecules interaction
(b) Sample amount: ≥200 pmol (~10 ug for 50 kDa protein)
(c) Sample concentration: ≥4.5 pmol/uL (~0.23 ug/uL for 50 kDa protein)
(d) Sample purity: ≥90%
(e) Platform: online-Pepsin-LC, Orbitrap HDX-MS
Please click the link below for the specification of Proteomics service
Sample requirement
2. Protein-peptide report. xlsx
Q1. What other applications does HDX have besides analyzing protein-antibody interaction site?
A: HDX can also identify protein-drug interaction site, or protein conformational change site.
Q2. Is it possible for me to identify protein-drug or protein-DNA interaction site?
A: Of course, just provide us the condition of the interaction, and we will evaluate the possibility.